Hello,
First, you should know that the Splunk app for Palo Alto Networks doesn't yet support PAN-OS 6.1 threat logs. The logs will be indexed and when they are supported even old logs will look right, but some of the fields may be a little off right now. Traffic, config, and system logs work fine.
Now regarding your question, it's good that you're getting system and config logs. The other log type require a log forwarding profile to be attached to a rule in your security policy. Make sure that there is traffic through the firewall that matches a rule in your security policy with a log forwarding profile attached. Once that's done, if you enable logging for the start or end of a session in that rule then you'll get traffic logs in Splunk, and if you add a security profile (like Vulnerability Protection or URL Filtering) to the rule then you'll get threat logs in Splunk.
... View more