Yes. Web interface is the only "standard" (not including any unpredictable things done by add-on developers) component which behaves differently. While all other "areas of activity" (inputs, outputs, inter-splunkd connections) require certs in a single-file form (from the top - subject cert, private key, certificate chain), web interface requires two separate files - one with the private key and another with the chained subject certificate. And TLS-protecting your web interface while desired as a general rule has nothing to do with inputs and outputs.
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